Name
   - COVID-19 Biomarker COVID20

Version
   - 1.0.36

Created on
  - 2021-04-13T12:26:40.456400

Modified on
   - 2021-07-07T13:11:38.852193

Created by
   - Amanda Bell [amandab2140@gwu.edu], Edmund Cauley [escauley@gwu.edu]

Authors
   - Nikhita Gogate [nikigogate@gwmail.gwu.edu], Daniel Lyman [danlyman@gwu.edu], Gracelyn Hill []

Checksum
   - c633c9bd3a0e1931656dd3f781b3a1d0

Usability Domain
   -  A0131 is a biomarker panel of 20 biomarker entities that enable prognosis of COVID-19 (DOID:0080600) disease course by measuring the change in distribution of 20 urinary peptides. The biomarker panel named COVID20, is composed of 20 endogenous peptides mainly derived from various collagen chains that enable differentiating moderate or severe disease from critical state or death with 83% sensitivity at 100% specificity. Biomarker data retrieved from PubMed [PMID: 32960510]

Description Domain
   Keywords
   - urine (UN: 0001088)
   - COVID-19 (DOID:0080600)

   Pipeline Steps
   - Step-0: 

Execution Domain
   Scripts

   Software Prerequisites
      Name: Python Library Organize
      Version: Python 3.6.9
      URI: 

I/O Domain
   Input Subdomain
      Name: human_covid19_biomarkers.csv
      URI: http://data.oncomx.org/ln2wwwdata/unreviewed/human_covid19_biomarkers.csv
      Name: Retrieved Publication from PubMed
      URI: https://pubmed.ncbi.nlm.nih.gov/32960510/
      Name: Google Form Submission
      URI: https://docs.google.com/forms/d/e/1FAIpQLSedK33fn8c6zJ2rrMDC-xftOgDbxy5op6n5uNZIwlwK-AtHwA/viewform
      Name: Biomarker_QC_Reviewed
      URI: https://docs.google.com/spreadsheets/d/1kCv3X7xAnVU-AS6asNC3MOKg0Zm00QwC/edit#gid=213872186
   Output Subdomain
      Name: human_covid_biomarker_COVID20.csv
      URI: http://data.oncomx.org/ln2wwwdata/reviewed/human_covid_biomarker_COVID20.csv